Archive: Food for Thought

Food for Thought: Weekly Wrap-Up

This week, Frankfurter Allgemeine Zeitung (FAZ) deals with potential origins of the enterohemorrhagic E. coli (EHEC) epidemic in Germany. Christina Hucklenbroich details the consequences of feeding cattle mixed provender, a forage that changes the environment of the intestinal tract so that it becomes an ideal habitat for bacteria like E. coli. In a separate article the same author deals with an EHEC outbreak in 1997 in the US which affected mostly women – similar to the current epidemic in Germany. Back then, the source had been alfalfa sprouts used in salads. While the ultimate source had never been found, scientists suspected that already the seeds had been contaminated. Richard Friebe, also in FAZ, deals with slurry from pigs, cattle, and fowl that is know to contain all sorts of bacteria and viruses. It is used either directly as fertilizer (though not on vegetables and salad plants) or may contaminate adjacent fields through spillover, spray or via irrigation using water contaminated with slurry.

Susanne Kutter in Wirtschaftswoche introduces Holger Zinke, co-founder and CEO of BRAIN AG, a biotech company specialized on “white” biotechnology, using the skills of microbes to re-design industrial processes or to come up with entirely new ones. Thereby, pharma and chemical industry can save energy, money, and expenses for raw materials. The article is part of a series on pioneers of the “greentech-era”, trying to change the industry to make it more energy-efficient and sustainable.

In Forbes, Matthew Herper analyses why scientists in Germany and China used small desktop sequencers by Ion Torrent rather than big machines by Illumina, Life or 454 Life Sciences to decipher the sequence of the EHEC strain rampaging through Germany. Herper claims it is speed and cost. However, the choice was also influenced by the fact that the sequence of the new strain matched strains with sequences available in public databases relatively closely so that puzzling together the short sequence data generated by the machine was easy.

In reporting on this year’s annual conference of the American Society of Clinical Oncology (ASCO), Andrew Pollack in The New York Times (NYT) introduces two drugs for the treatment of melanoma: vemurafenib (developed by Genentech, part of Roche Group), which attacks a specific mutation accelerating tumor growth and Yervoi ipilimumab (developed by Bristol-Myers Squibb), which unleashes the body’s immune system to fight the cancer. Yervoi was approved by FDA in March this year. Pollack also features latest clinical results for Aromasin exemestane, a drug marketed for preventing recurrences of breast cancer.

Gina Kolata, also in NYT, deals with the phenomenon of “linguistic toxicity”, i.e. drug labels listing more and more side effects, even contradictory ones such as that a medication can cause diarrhea or constipation. As of today, drug labels in the US list an average of 94 side effects (the top numbers already are exceeding 500), despite efforts of FDA to make drug makers avoid listing of side effects that are infrequent and minor, commonly observed in the absence of drug therapy or not plausibly related to drug therapy. Main reason is pharma companies trying to protect themselves against lawsuits.

Last not least, New Scientist features the latest advice for those of you on diet: psychologist found that if you succeed convincing yourself that everything you eat bears enormous amounts of calories, your ghrelin hormone level will drop much lower after eating so that you feel being full faster.

Food for Thought: Weekly Wrap-Up

Joachim Müller-Jung in Frankfurter Allgemeine Zeitung (FAZ) reports on the rapid spread of infections with enterohemorrhagic Escherichia coli (EHEC) in Germany. In about 20-25% of cases, the disease leads to the life-threatening hemolytic uremic syndrome (HUS) associated with kidney failure. Jung reports about promising treatment strategies using Soliris eculizumab. The monoclonal antibody by Alexion Pharmaceuticals has been approved in the US and the EU in 2007 for the treatment of paroxysmal nocturnal hemoglobinuria.

Also in FAZ, Nicola von Lutterotti features results from molecular psychiatry studies in children brought up in orphanages and adults suffering from trauma. Results demonstrate that there is a strong association between length of stay in an orphanage and factors like learning ability as well as length of telomers. Adults suffering severe trauma during childhood also have significantly shorter telomers.

In Focus, Monika Preuk reports on instant dental implants for diabetics, osteoporosis patients and smokers. These patients often cannot undergo conventional implantation procedures that need careful planning and complex steps of building bone material, placement of titanium posts and periods of long healing times. The new method involves skewed planting of very long implants into the healthy parts of the jawbones. The method stabilizes the jawbone so that implants can be planted within a day.

Matthew Herper in Forbes introduces the 25 most innovative countries in biology and medicine based on data provided by SciVal analytics, an Elsevier division. The complex analysis is based on publications output, number of citations, etc. Still the US dominates the fields, and papers by US scientists are more likely to be cited by other researchers than those in any country – except the Netherlands and Switzerland.

Andrew Pollack in the New York Times introduces Sherwood L. Gorbach, a researcher who helped to develop Dificid, a novel antibiotic against severe diarrheas. The drug by Optimer Pharmaceuticals has just been approved by FDA for the treatment of Clostridium difficile-associated diarrhea.

The Economist features new attempts to vaccinate people against drug abuse. The challenging task is to develop an effective vaccine against  really small and therefore very flexible molecules. A new trick applied for the design of a metamphetamine vaccine uses computer models to design haptens mimicking various metamphetamine-shapes and using these haptens to generate antibodies. Already it has been possible to generate efficacious metamphetamine-antibodies in mice with this method.

And finally, Die Zeit this week deals with the question whether mosquitos get drunk upon sucking blood from drunk people. The answer to the question is that after the blood meal, the mosquitos have about half the blood alcohol concentration of their victim. However, it is unclear whether they show behavioral deficits thereafter. 😉

Food for Thought: Weekly Wrap-Up

Sascha Karberg in Frankfurter Allgemeine Sonntagszeitung (FAS) features the latests attempts of biologists to understand and replicate the endosymbiosis of cyanobacteria and cells of eucaryotes that led to the chloroplasts found in all green plants. Already in the 1970s, biologists successfully incorporated cyanobacteria into an amoeba and meanwhile, several animals carrying endosymbionts providing them with extra energy from the sun have been discovered. This is now replicated in the lab. Using genetically engineered cyanobacteria, scientist recently created zebrafish larvae as well as mice and hamster cells with endosymbionts that not only survive but replicate. Karberg also explains why this will not lead to green cows living on sunlight.

Silvia von der Weiden in Die Welt introduces novel findings about the role of water molecules in protecting and maintaining the DNA geometry. Reducing or expanding the size of the water sheath covering the DNA changes the conformation of the molecule as if activating a switch. The findings may be used to create novel DNA-based nanotools or develop DNA-binding drugs to influence gene activation.

In Forbes, Mattew Herper features a graph proving Moore’s law wrong – at least in the decline of cost of DNA sequencing: the cost of getting DNA data (i.e. cost per genome as well as per megabyte of DNA sequence) is dropping way faster than the cost of processing data on computers. In a separate article, Herper endorses Wall Street’s forecast, that Pfizer’s Prevnar 13 vaccine against pneumococcus infections will be the company’s biggest seller in five years.

The Economist features an Italian engineering firm developing a system to collect oil spills in the sea that is based on wool. Already the company has been granted a patent of its containerized, ship-based kit. After absorbing the oil, the wool is pressed to recover the oil and the reused.

Andrew Pollack in the New York Times reports about setbacks in the development of treatments based on stem cells. Experiments recently  showed that induced pluripotent stem cells – which are thought to be superior both ethically and technically to embryonic stem cells – are rejected by the immune system. However, it is not yet clear whether the results obtained in mice hold true for humans, too.

 

Food for Thought: Weekly Wrap-Up

In Frankfurter Allgemeine Zeitung (FAZ) Martina Lenzen-Schulte this week reports about an oncology symposion in Wiesbaden/Germany that dealt with oncology patients increasingly turning towards alternative medicines – 40 to 70% according to recent estimates. Oncologists now start to notice they cannot ignore patents’ needs and hopes, and therefore a number of clinicians have turned to looking at available studies on complementary medicine to separate the wheat from the chaff. However, it turns out that many of these studies – on mistletoe therapy as well as on dietary recommendations – are insufficient to provide sound evidence.

Werner Bartens in Sueddeutsche Zeitung features a 3,700 patients study published in the Journal of the American Medical Association demonstrating that contrary to common wisdom low salt diets increase the risk of heart attacks and stroke.

In Wirtschaftswoche, Susanne Kutter introduces the Diapat diagnostic test developed by German biotech company Mosaiques DiaPat GmbH that analyses more than 6,000 different peptide and protein molecules in human urine in one run. The test can be used to diagnose and even predict the onset of diseases. It has just been approved by FDA for the diagnosis of renal diseases. Already, the company markets a prostate cancer urine test in Germany. Mosaique’s test, Kutter claims, is but one of the many achievements to come from proteomics. She adds that the tests will have the potential to save the healthcare system billions of Euros.

Haydn Shaughnessy in Forbes states the record of cancer treatment still looks poor, with cancer mortality not improving a lot – as for example compared to heart diseases. Likewise, many preventive measures such as exercise and low fat diets don’t work. Shaughnessy therefore makes the case to support crowdsourcing approaches to develop a cancer cure like Pink Army and Cancer Commons (see akampioneer’s earlier entry on Open Source Principles – a Concept for the Life Sciences?). Also in Forbes, Matthew Herper forecasts that Pfizer will break itself up and spin out companies soon.

Eric Pfanner in New York Times looks at new European ventures to fill a void in world news after so many news organizations are laying off journalists or closing shop. As examples, he introduces Worldcrunch, a web-based start-up translating newspaper articles from around the world into English and Presseurop which translates into other languages, too.

In the New Scientist Jessica Hamzelou writes that people easily distracted might have more grey matter in their brains than focused people. In a separate article, she also features a pacemaker-like, implantable device that can deliver timed doses of medications for a year. Boonsri Dickinson, also in New Scientist, interviews nobelist Eizabeth Blackburn, the co-discoverer of the telomerase enzyme and its role in aging. Blackburn co-founded biotech company Telome Health, which is now starting to sell a test for telomere length. While at present it is sold for research purposes, e.g. to know more about telomer length as markers of aging, the test will be offered to the public through physicians for $200 later this year. Ferris Jabr in New Scientist introduces an approach fastening nanocapsules filled with interleukins to T cells as a way to cure cancer. So far, it seems to work in mice.

And here our favorite quote from Matthew Herper’s blog, who recently mused about whether entrepreneurs share some genetic characteristics, and if so, whether one could invent an antibody to turn someone into an entrepreneur: “‘Entrepreneur Antibody:’ Serious Side Effects Might Include Visual Hallucinations of Venture Capital.”

And finally, Norbert Lossau in Die Welt features a study by LinkedIn into the most common given names of CEOs, finding that in Germany they are Wolfgang, Christoph and Michael. In France, Gilles is number one, while it is Charles in the UK, Ray in Canada, Guido in Italy and Howard in the US. Marketing people often have short names like Chip, Todd or Trey, while engineers seem to have much longer give names. So think twice before naming your next newborn!

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